Molecular mechanism of drought stress tolerance in barley (Hordeum vulgare L.) via a combined analysis of the transcriptome data

نویسندگان

چکیده

One of the main issues addressed by phytology in recent years has been plant tolerance mechanisms for abiotic stress. No combined analysis made to identify genes involved drought stress tolerance. The meta-analysis microarray data related was analysed R software packages and showed 3 029 upregulated 017 downregulated genes. were mostly protein, response, Cys2His2 Zinc Finger Transcription Factor (C2H2 zinc finger TF). mainly late embryogenesis abundant basic leucine zipper (bZIP) TF. common gene ontology (GO) terms metabolic process, response stimulus, cellular photorespiration. up down meta-differential expressed (meta-DEGs) belonged those following Kyoto Encyclopedia Genes Genomes (KEGG) pathways including: biosynthesis secondary metabolites, hormone signal transduction, mitogen-activated protein kinase (MAPK) signalling pathway, RNA degradation. Moreover, genes, TFs with a high percentage Teosinte branched1/Cincinnata/proliferating cell factor (TCP), helix loop-helix (bHLH) bZIP. Next, hub thiamine thiC, 4-hydroxyphenylpyruvate dioxygenase, ribose-5-phosphate isomerase precursor heat shock protein. associated elongation Ts, aldehyde dehydrogenase, trigger factor. Finally, from present compared previous studies on qRT-PCR results their expressions confirmed. Based findings current study, novel insights into molecular can be provided various candidate introduced barley breeding.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Evaluation of Drought Stress Indices in barley ( Hordeum vulgare L . )

In order to evaluation of drought resistant indices in barley (Hordeum vulgare L.), 10 barley genotypes evaluated in Completely Randomized Design with three Replications in two conditions, (under drought stress and in normal with irrigation in planting, flowering and grain filling stages) in Islamic Azad University, Miyaneh Branch Research Farm in 2012. Drought tolerant indices basis of yield p...

متن کامل

Evaluation of Drought Tolerance in Barley Genotypes (Hordeum vulgare L.) using Drought Tolerance Indices

Extended Abstract Introduction and Objective: Drought stress is one of the most important factors in reducing yield and barley production in rainfed arid regions, and counteracting or reducing the effect of stresses as a useful solution to increase barley yield. Therefore, improvement of stress-tolerant and suitable barley cultivars for arid and semi-arid regions is essential. Material and Me...

متن کامل

Lysine Catabolism in Barley (Hordeum vulgare L.).

Lysine catabolism in seedlings of barley (Hordeum vulgare L. var. Emir) was studied by direct injection of the following tracers into the endosperm of the seedlings: aspartic acid-3-(14)C, 2-aminoadipic acid-1-(14)C, saccharopine-(14)C, 2,6-diaminopimelic acid-1-(7)-(14)C, and lysine-1-(14)C. Labeled saccharopine was formed only after the administration of either labeled 2,6-diaminopimelic acid...

متن کامل

Evaluation of drought tolerance indices for the selection of Iranian barley (Hordeum vulgare) cultivars

Drought is an important factor limiting crop production in arid and semi-arid conditions. Drought indices which provide a measure of drought based on yield loss under drought condition in comparison to normal condition was used for screening drought-tolerant genotypes. This study was conducted to determine drought tolerant genotypes with high yield in stress and non-stress conditions. Ten barle...

متن کامل

Identification of a Phytase Gene in Barley (Hordeum vulgare L.)

BACKGROUND Endogenous phytase plays a crucial role in phytate degradation and is thus closely related to nutrient efficiency in barley products. The understanding of genetic information of phytase in barley can provide a useful tool for breeding new barley varieties with high phytase activity. METHODOLOGY/PRINCIPAL FINDINGS Quantitative trait loci (QTL) analysis for phytase activity was condu...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Czech Journal of Genetics and Plant Breeding

سال: 2023

ISSN: ['1212-1975', '1805-9325']

DOI: https://doi.org/10.17221/69/2022-cjgpb